Bioinformatics Base
Building a home base for bioinformatics in the era of biology.
Visit our website at bioinformaticsbase.com or bioinformaticsbase.substack.com to read our articles.
@debvendramini.bsky.social
Pancreatic Tumor Microenvironment, immunosuppression and Fibroblasts + ECM. Assistant Scientist and co-Leader of the Vendramini-Francescone Lab at Henry Ford Pancreatic Cancer Center, HFH+Michigan State University, Detroit-MI. Breast cancer survivor 💪🏽
@rafrancescone.bsky.social
Pancreatic Cancer Researcher at Henry Ford Health + Michigan State University Health Sciences. Co-leader of the Vendramini-Francescone Lab. Luckiest hubby and daddy in the world. Go Boston!
@jennyklomp.bsky.social
ERK enthusiast; interested in understanding aberrant kinase signaling in KRAS mutant cancer; Assistant professor @Michigan State University in Department of Medicine; want to visit every Natl Park #medsky #academicsky #scisky #biosky
@aneedasgupta.bsky.social
She/her, Science, Plants and Dogs. Studying muscle 🔁 pancreas tumor crosstalk/cachexia NCI K99/R00 Fellow Incoming new PI at UNC Charlotte Fall 2025
@arispapargyriou.bsky.social
PhD candidate TU Munich and Helmholtz Munich Cell plasticity•organoids•EMT•treatment resistance Progressive left thinker•human rights 🇬🇷 in 🇩🇪
@sineadtoomey.bsky.social
Cancer researcher and lecturer in RCSI University of Medicine and Health Sciences, Ireland | Researching breast, lung and GI cancers
@katesears.bsky.social
Hi I'm Kate, community lead for Medical.watch. Want practice changing updates in oncology/hematology? Get our weekly newsletter and join 2400+ clinicians. Subscribe for free: Medical.watch About us: tinyurl.com/Medicalwatch
@teiflab.bsky.social
Teif lab at the University of Essex. We work on gene regulation in chromatin and applications to liquid biopsies, using approaches of genomics, biophysics and bioinformatics. Our focus is nucleosomics, TF binding, CTCF, cfDNA. https://generegulation.org
@alvarocuriel.bsky.social
Associate Research Scientist - Columbia University. Systems Biology and experimental researcher. Pancreatic Cancer and hypoxia. Former CNIO PhD student and UNC Rising Star. Music, travel and sports lover. Spaniard in the USA
@hallben.bsky.social
Professor in computational cancer biology at UCL interested in disease, mutations, and aging. Funded by CRUK, MRC and Royal Society. Personal account for science, code, music, photography! “Tired is the new awake”
@cancerevo.org
Mathematical Oncologist at the Integrated Mathematical Oncology department (@mathonco.bsky.social) at the Moffitt Cancer Center (@moffittnews.bsky.social). Married to the lovely @parmvir.com. On mastodon with @david@fediscience.org
@trevorgraham.bsky.social
Director, Centre for Evolution and Cancer @cec-icr.bsky.social at @icr.ac.uk Genomics, epigenetics, evolution, mathematical modelling, data science, bowel cancer
@mathcancer.bsky.social
Associate Dean for Undergraduate Education at Indiana University School of Informatics, Computing and Engineering • mathematical biologist • multicellular systems & cancer with PhysiCell • OpenSource • astrophotography Web: http://MathCancer.org
@frohlich.bsky.social
Dynamics of Living Systems (https://www.frohlichlab.com) group leader @thecrick.bsky.social Understanding signalling & cell state dynamics through mathematical modelling and machine learning.
@crick.ac.uk
We're the Crick, a biomedical research lab in London working to figure out how life works. Home to more than 2,000 scientists and a free public exhibition space. https://www.crick.ac.uk/
@cruk-mi.bsky.social
We are a leading Cancer Research Institute within The University of Manchester, funded by Cancer Research UK (@cancerresearchuk.org) https://www.cruk.manchester.ac.uk/
@vincent-noel.fr
Research scientist in the Computational System Biology of Cancer team at Institut Curie, Visiting Scientist in São Paulo Modeling and simulating biological systems with multiscale frameworks. #MaBoSS, #PhysiBoSS developer
@yosoykit.bsky.social
Assistant Professor at UCSD Medicine, Division of Biomedical Informatics. Researching cancer evolution and early detection. Check out our work at www.qcclab.com
@robjohnnoble.bsky.social
Senior Lecturer (≡ associate professor) in applied maths @citystgeorges.bsky.social, investigating the evolution and ecology of cancer. Dad of two small kids. robjohnnoble.github.io
@sysbiocurie.bsky.social
@qmbci.bsky.social
Barts Cancer Institute is a leading UK cancer research institute, part of Queen Mary University of London and a partner in the Cancer Research UK City of London Centre. 🧪🧬🔬 https://www.bci.qmul.ac.uk/
@mathonco.bsky.social
Department of Integrated Mathematical Oncology at the Moffitt Cancer Center, Tampa, FL. https://www.moffitt.org/research-science/divisions-and-departments/quantitative-science/integrated-mathematical-oncology
@fertiglab.bsky.social
Inter-dimensional cancer biologist. Director of the @genomescience.bsky.social at @umbaltimore.bsky.social.
@drannecarpenter.bsky.social
Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
@mglerner.bsky.social
Comp. biophysicist at Earlham: Biomembranes, comp oncology. Reducing distracted hyperbusyness. Decolonizing my sylabus. mglerner@pm.me @mglerner@mastodon.cloud @mglerner at bird site ORCID: 0000-0003-1222-3212
@chrismiller.science
I study cancer at Washington University in St Louis. Cancer Genomics, Bioinformatics, Data Viz, Tumor Evolution, AML, Immunotherapy, Irreverent humor 🧬 🖥️ mostly @chrisamiller on other platforms
@kezc.bsky.social
Lecturer in cancer bioinformatics at Cardiff University. https://github.com/kcleal
@jjmarshall.bsky.social
Research Programme Manager for Cancer Research UK. Building diverse and impactful discovery science communities. Biochemist of 20y. Big fan of trees and wild spaces. Serial hobbyist: Theatre Tech / Climber / Caver / Softballer. ProEU. Opinions mine.
@hughselwayclarke.bsky.social
PhD student making computational models of somatic evolution in healthy lungs in Sam Janes' lab at UCL. Background in maths at Cambridge. He/him.
@emilydolson.bsky.social
Assistant Professor at Michigan State University studying eco-evolutionary dynamics in artificial life, cancer, and evolutionary computation. she/her 🏳️🌈 @emilydolson@ecoevo.social on Mastodon
@evolsci.bsky.social
dynamics of cancer by means of ecology & evolution, and modeling & simulation. views my own. https://paltrock.github.io/
@fcastro.bsky.social
Computational biologist at ETH Zürich | Cancer genomics | Metastasis | Single cell ORCID: 0000-0001-6111-0754
@drwilliamhill.bsky.social
Cancer cell biologist | Somatic evolution and cancer initiation | postdoc @SwantonLab @TheCrick. Views my own
@sandyanderson.bsky.social
Mathematical oncologist working on cancer evolutionary therapy #AndersonLab @mathonco.bsky.social Chair @EvolTherapy.bsky.social Director @smbmathbiology.bsky.social Fellow and former President
@gibin.bsky.social
Applied Mathematician, Professor @SwanseaUni. Interests: Mathematical Biology, Mathematical Oncology, All views my own
@rebeccabekker.bsky.social
Applied mathematician focused on Cancer and Immunology. Currently studying the impact of chemotherapy on the immune system. Based at USC.
@jamie-blundell.bsky.social
Evolution, cancer, immunology, math(s) Ursula Zoellner Professor of Cancer Research University of Cambridge blundelllab.com
@rborza.bsky.social
PhD Candidate at Netherlands Cancer Institute〡 Curious about AI Biology, Synthetic Biology, and Protein Design 🔬〡 Bioillustration using Blender🧬〡 🇪🇸 🇳🇱 https://beacons.ai/rborza
@saezlab.bsky.social
Account of the Saez-Rodriguez lab at EMBL-EBI and Heidelberg University. We integrate #omics data with mechanistic molecular knowledge into #opensource #ML methods Website: https://saezlab.org/ GitHub: https://github.com/saezlab/
@alvarokohn.bsky.social
Associate Professor @uio.no and group leader at Oslo University Hospital. Mathematician working on personalized cancer medicine, using mechanistic modeling, machine learning or combinations of both https://www.med.uio.no/imb/english/people/aca/alvarok/
@yotamd.bsky.social
Epigenomics and chromosome topology in cancer • Assistant Professor, Faculty of Medicine, Hebrew University of Jerusalem • yotamdrier.ekmd.huji.ac.il
@anuragverma.bsky.social
Assistant Professor | Biomedical & Computational Geneticist | Associate Director, Clinical Informatics & Genomics, Penn Medicine Biobank | UPenn
@dannyarends.nl
Associate Professor at Northumbria University & Lecturencer @ https://youtube.com/c/DannyArends
@vjsanchez.bsky.social
Associate Professor at UFV. Head of the Molecular Oncology Group. Hospital 12 de Octubre, Pancreatic Cancer, 🧪🔬Epigenetics, Therapeutic targets, Python, Machine Learning, Statistics and Bioinformatics. 🖥️🧬
@rohitfarmer.com
I am a computational biologist by training, with interests in the outdoors, self-hosting, Ham radio, and FOSS. https://rohitfarmer.com; gemini://rohitfarmer.com; https://dataalltheway.com; https://outdoorsyindians.com
@anush-chp.bsky.social
Engineering the code of life for cellular insights + new chemistries/functions/technologies w #SynBio #CompBio | Research Associate w GM Church @ Harvard/Wyss, G Stephanopoulos @ MIT | #BioChemE #GeneticCodeExpansion #Metabolism www.anushchiappinopepe.com
@astrobiology.bsky.social
Astrobiology.com - Exploring the living universe since 1996. Life Looks For Life. Vita quaerit vitae.
@michaelhoffman.bsky.social
Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network. Associate Professor, Medical Biophysics, University of Toronto. Disclosures: https://github.com/michaelmhoffman/disclosure/
@kennypavan.com
Science, nature photos, mental-health advocate, and star trek 🖖 Bioinformatics | ML | PhD Candidate @ OHSU studying synaptic connectivity. my_opinions=True
@simongroth.com
Curious writer. ‘Heartwarmingly blunt.’ New book ‘Ephemeral City’ is available now. Stories and ephemera published in a box that can be read in any order you like.