BioImage Analysts
Created by
@haesleinhuepf.bsky.social
@gallegolab.bsky.social
We are the Biophysics in Cell Biology lab! Creativity and light microscopy to study cell growth at @upfbarcelona.bsky.social 🌍 www.gallegolab.org
@nrepina.bsky.social
Studying multiscale emergence (cell -> tissue) at FMI Basel complex systems | 3D shape | morphogenesis | self-organization | philosophy of biology | systems evo-devo | image analysis | illustration ✨ always questioning, forever inspired ✨
@romainbioimage.bsky.social
Phenotyping, AI and 3D models for agroecology. Woke & DEI nerd, they say. Prez of French Scouting Fed. (125k members). Worried about adults in power, helping adults of tomorrow. Love craft beer and ultra-tourism on a bike.
@neurophysicstn.bsky.social
Interdisciplinary research lab, Center for Mind/Brain Sciences #CIMeC PI: Albrecht Haase | #Neuroscience | #QuantumBiology | #Olfaction | #Vision | #Magnetoreception | #CalciumImaging | #Insects | #Honeybees | #UniTrento https://r.unitn.it/en/cimec/nphys
@tom-bssnnt.bsky.social
Astronomy lover, PhD on retinal neural cells stuff, microscopy facility staff. Can you see the connection?
@marabuuuu.bsky.social
Communicative mind between biology and computer science. http://scads.ai / uni leipzig CMS master student tu dresden #bioimageanalysis 👩💻 https://github.com/marabuuu ✏️ https://focalplane.biologists.com/author/marabuuu/
@optophysakhil.bsky.social
💡Investigating clinically relevant classical and quantum optics techniques and devices 🥼Biophotonics and biomedical optics 📍Dept. of Biomedical Engineering, @UniStrathclyde.bsky.social👨🏻🔬 🗞️Research team updates @KallepalliLab.bsky.social 🤝
@octavio-rm.bsky.social
PhD student Waterfowl appreciator 🦆🪿🦢 Bioimage analysis 🔬, Quantitative Biology📊 and Deep Learning 💻 Trying to understand the diversity of bacterial cell size and its evolution From 🇨🇱 in 🇩🇪 he/him
@acorbat.bsky.social
Physicist, image analyst and 🔬 | Automation and teaching fan #Python #Pi | #bioimage #analyst at @biif_sweden
@mattvxwhelan.bsky.social
Wellcome Trust Early Career Investigator allied with Jolly and Henriques labs based in UCL #Cellular #Microbiologist doing #LIVE/#SR #Microscopy of #HIV, #NuclearPores #Tcells and all things #Trafficking and #Host #Cell ?manipulation by #Pathogens!
@kallepallilab.bsky.social
🥼Research focussed on clinical translation of classical and quantum optics, led by @OptoPhysAkhil.bsky.social 📝Biophotonics and biomedical optics 📍Dept. of Biomedical Engineering, @UniStrathclyde.bsky.social, Glasgow UK 📸 🩻 🔬 🛜 https://kallepallilab.com
@imag-ic.bsky.social
The Institut Cochin photonic imaging facility IMAG’IC (UnivParisCite_Inserm_CNRS) #Microscopy #FLIM #STED-FLIM #BioImaging #DataBase #MultiphotonFLIM #Intravital-Imaging #HistoCytometry #TissueClearing #Biosensors #FRET-FLIM #SMLM #ExM #Deeplearning
@erpel.bsky.social
phd student working on bayesian methods in bioimage analysis; @fz-juelich.de, @hds_lee & @lmumuenchen.bsky.social; bsc+msc in comp sci @univie.ac.at; based in karlsruhe; ripaul.github.io
@gaellel.bsky.social
Bioimage analysis and mathematical modelling, mainly in developmental biology. Research engineer @CNRS.bsky.social @pasteur.fr
@cedric-moisy.bsky.social
Research scientist 🍇🖥️🌱🦠🔬 Plant Pathology | 3D+t imaging | MRI | Xrays tomography | IA | Image Analysis Trunk diseases | Fungal Pathogens | Genetics | Molecular Biology | Grapevine | Breeding & Selection Working at French Wine and Vine Institute France
@joelluethi.bsky.social
Head of Research and Development of the BioVisionCenter at the University of Zurich
@loicaroyer.bsky.social
Director of Imaging AI & Sr. Group Leader @czbiohub SF. Researcher at the meeting point of #AI, #Microscopy, and #Biology using #zebrafish as model — co-creator of @napari_imaging and #Omega. #devbio #zebrahub #deeplearning #lightsheet #Imaging #dataviz
@darrenthomson.bsky.social
Imaging Scientist @mrccmm MRC Centre for Medical Mycology at UoExeter. Applying and resourcing MYCOscopy to understand human fungal pathogens - always keen to chat
@vgelfand.bsky.social
Cytoskeleton; microtubules; motors; Drosophila https://www.gelfandlab.org/
@barnabalab.bsky.social
I lead a young, vibrant research group at the University of Kansas - Pharmaceutical Chemistry. My lab works on metabolic adaptation: how our cells rewire their metabolism when challenged by chemical and nutrient stressors.
@mariacardei.bsky.social
PhD student. Human-AI Technology Lab @ UVa. AI for health, computational behavior modeling, data science. Nature enthusiast. Rescue dog mom. Gardener. https://mariacardei.github.io/
@larshubatsch.bsky.social
Hybrid Experimentalist/Theorist (MPI-CBG & MPI-PKS). Interested in developmental biology, pattern formation, and quantitative (single molecule) imaging: how to fit physical mechanisms out of complex data.
@mdoube.bsky.social
Pixel herder, liminal space inhabitant, former lots-of-things, future something else, currently the same as ever.
@kenibrewer.bsky.social
Open-source x Science - Dev Advocate @ Seqera Bioimaging enthusiast
@giudica.bsky.social
Associate Professor (Senior Lecturer) at the University of Strathclyde. PI at CeMi. Interested in Smart Microscopy, Cell Engineering, Bioimage Analysis and Organs-On-Chip. Formerly Harvard and Federico II 🏳️🌈 📍Glasgow https://dicaprio.bioe.strath.ac.uk
@caporalclement.bsky.social
PhD Student @LabOptBio. In love with education, sciences, and poetry. (Bioimage analysis) He/him
@paulvilloutreix.bsky.social
Mathematical and systems biologist | Junior Professor INSERM & Group Leader Turing Center for Living Systems | https://bioml.lis-lab.fr
@jasonyanglab.org
Assistant Professor at Rutgers New Jersey Medical School | Systems Biology, Synthetic Biology, Machine Learning, Antibiotic Resistance, Tuberculosis, Heart Failure, Immunoengineering
@truenorth-ia.bsky.social
Contract Research and Development Engineer, Image Processing. XC skier. Stockade-athon 15 km Running Road Race Director.
@carobarisch.bsky.social
Associate professor & cellular microbiologist @CSSB-Hamburg, @FZBorstel and @UniHH! Interested in host-pathogen interactions 🧪🦠🧫, lipids and microscopy 🔬! Mother of twins. T1D. www.barischlabcssb.com
@saramcardle.bsky.social
Staff Scientist at the La Jolla Institute Microscopy and Histology Facility and a CZI Imaging Scientist. I love cat videos and microscopy images and I believe that Matlab is better than Python :)
@teunhuijben.bsky.social
Scientist/PostDoc with Loïc Royer at Chan Zuckerberg Biohub, San Francisco 🔬 image analysis | localization microscopy | machine learning, 🇳🇱 by bike 🚲 📍San Francisco
@augenstreich.bsky.social
Postdoc, image analysis shenanigans, mycobacterium tuberculosis, macrophages and membrane dynamics
@biovoxxel.de
BioImage Analyst, PhD in biology, Fiji/ImageJ, Inkscape, Blender, Java, Scientific Illustration, Image Integrity 🧪🔬💻 🇩🇪 🇬🇧 🇪🇦 forum.image.sc biovoxxel.de https://linktr.ee/biovoxxel #biovoxxel #bioimageanalysis #bluesci #sciviz #BIAToolTip
@ayakimovich.bsky.social
I am a group leader at Helmholtz in Görlitz, Germany and an Associate Prof of CS at Uni Wroclaw, Poland. My group is working on Machine Learning for Infection and Disease. Personal account and opinions. Website: ayakimovich.github.io / www.casus.science
@zacswider.bsky.social
Biologist turned programmer. Working on data pipelines for high throughput imaging. Mostly posting about Python and Rust but no guantees :)
@rodrigofg.bsky.social
Epithelial morphogenesis, microscopy and image analysis. Cytoskeleton and cell adhesion. Author of pyjamas.readthedocs.io and bitbucket.org/rfg_lab/junkie. Keeping a group of brilliant scientists entertained at www.quantmorph.ca. Also marathons and sushi.
@aneeshsathe.com
Now: Drug Discovery- Bayesian, ML, GNNs, KGs, Organoids Previously: Founder and CEO: AI for cancer diagnosis ‘14: PhD Biophysics #DataBS #ML #AI #KnowledgeGraphs #DataScience, #DataViz, #Stats, #Python #Organoids aneeshsathe.com 🧪🧬💻🤖🔬🦠🩺💊🐍 📍San Diego
@trackingactions.bsky.social
Scientist 👩🔬 & EPFL Prof 🇨🇭 | DeepLabCut.org , 🦓 cebra.ai | neuroscience & ML 🧠 mackenziemathislab.org | ✨CSO at Kinematik.ai | occasionally 🐦⬛birds/🌱outdoors/🍣food/👠fashion
@dornan.bsky.social
🔬Deputy Lead - Cellular Analysis Facility - Shared Research Facilities MVLS, University of Glasgow. Fly Geneticist that liked Microscopy - now a Microscopist that likes Genetics. All views - generally - my own. (He/Him) 🇨🇦🏴 ORCID: 0000-0002-5228-2893
@jstriebel.bsky.social
Code Enthusiast & Software Engineer, he/him. 💻 Python, Medical Image Processing, Distributed Computing, Data Science & ML 💼 Aignostics 🌐 jonathanstriebel.de 📝 codical.org
@jsauce7.bsky.social
Professor of Biomedical Engineering and Cardiovascular Medicine at UVA. Systems biology to discover drugs for heart disease. Hiking with my dog in Shenandoah NP, around Charlottesville. https://engineering.virginia.edu/faculty/jeffrey-saucerman
@dgaboriau.bsky.social
Imaging Scientist at Facility for Imaging by Light Microscopy (FILM) @imperialcollegeldn.bsky.social Previously FILM facility manager. Dad, Cell biologist, PhD/postdoc @uniofcam.bsky.social. Opinions my own.
@maweigert.bsky.social
Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ
@preibischs.bsky.social
Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia
@kevinyamauchi.bsky.social
🔬 studying form and function at ETH D-BSSE 🏝️ steering council and core dev of napari https://kevinyamauchi.github.io/
@nicodf.bsky.social
Biochemist, microscopy enthusiast, image analysis nerd Powered by Wishful Thinking™ Researcher @ Neurophysiology Lab, IMBICE (http://imbice.gov.ar), La Plata, Argentina
@guiwitz.bsky.social
Curious scientist and classical music enthusiast. Currently Bioimage Analyst and Data Scientist at the Data Science Lab of the University of Bern. Previously @epfl, @harvard, @biozentrum
@enicolay.bsky.social
Doctoral Researcher at Tal Lab (@tamaratal.bsky.social), UFZ Leipzig 🧪🌊 | Intrigued by #EntericNervousSystem and #InnateImmunity in #Zebrafish 🐟🔬💻
@fedegasparoli.bsky.social
🔬🧑💻 Research Associate - Image Analysis Colaboratory @ Harvard Medical School
@schatzcz.bsky.social
BioImage Analysis at Vinicna Microscopy Core Facility & assistant professor at UCT Prague focused on medical signal and image analysis. Spearheading the CzechBIAS.
@adamltyson.com
Head Research Engineer at Sainsbury Wellcome Centre, UCL. I lead @neuroinformatics.dev & @brainglobe.info. We build open source software for neuroscience and machine learning. Runner, cyclist, sandwich enthusiast. https://adamltyson.com
@jni.fosstodon.org.ap.brid.gy
Core dev and co-founder napari.org Core dev scikit-image.org Co-author elegant-scipy.org Research Fellow at https://www.monash.edu/researchinfrastructure/eresearch […] [bridged from https://fosstodon.org/@jni on the fediverse by https://fed.brid.gy/ ]
@jwindhager.bsky.social
Bioimage Analyst / RSE at the SciLifeLab BioImage Informatics Unit
@hms-iac.bsky.social
News from the Image Analysis Collaboratory at Harvard Medical School. Teaching, research and promoting best practices in Bioimage Analysis. Get in touch: https://iac.hms.harvard.edu/.
@strigaud.bsky.social
Bio-image Analyst, Computer scientist, and plenty of other things that end in «-ist» @institutpasteur.
@elfulbito.bsky.social
Core Facility Manager @ci2a.bsky.social . Biologist, 🔬 enthusiast. Elise's companion. Father of two little monsters.
@kephale.bsky.social
Images, AI, ML, and ALife. Former: @hampshirecolg @brandeisuniversity.bsky.social @harvardmed.bsky.social @uidaho.bsky.social @hhmijanelia.bsky.social @mdc-berlin.bsky.social @ORNL. Now @chanzuckerberg.bsky.social. Opinions are mine.
@ctrue.bsky.social
Not as bad as I feared, but not as good as I hoped.
@simonfn.bsky.social
BioImage analysis and teaching Harvard Medical School | Previously ETH, Princeton, MPI-PKS, LENS, Niels Bohr Institute, University of Oxford, Aarhus University. https://iac.hms.harvard.edu
@cppape.bsky.social
Group leader @ Uni Göttingen for Computational Cell Analytics. Working on AI for biology and medicine with a focus on microscopy image analysis with deep learning. https://user.informatik.uni-goettingen.de/~pape41/
@jwpylvanainen.bsky.social
Image analysis | Infrastructure | Education | Post-doctoral researcher
@lhinderling.bsky.social
tries to make microscopes smarter · bioimage analysis, optogenetics, ml, 3d printing, open science · phd student in cellular signalling dynamics @PertzLab
@ilastik-team.bsky.social
Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
@globias.bsky.social
Global BioImage Analysts’ Society, a non-profit association under construction, aims to be a worldwide society for all those interested in bioimage analysis
@nicostuurman.bsky.social
@ahklemm.bsky.social
BioImage Analyst Head of BioImage Informatics, SciLifeLab NBIS, Sweden https://www.scilifelab.se/units/bioimage-informatics/
@lankylaste.bsky.social
Data and image analysis for all things bio | Computational tinkerer | Researcher | Bioimage analyst
@computingnature.neuromatch.social.ap.brid.gy
group leader @ HHMIJanelia, thinking about thinking, 🔬#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | Ⓥ | […] [bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]
@nkiaru.bsky.social
Microscopist and Bio-Image Analyst for the BioImaging and Optics Platform https://biop.epfl.ch/ at EPFL
@nfdi4bioimage.bsky.social
NFDI4BIOIMAGE, a consortium of the NFDI in Germany, is a legally non-independent collaboration project. It focuses on research data management for bioimaging and image analysis. The consortium does not act autonomously towards third parties.
@kuglerelisabeth.bsky.social
Director Zeeks - Art for Geeks | Biomedical Image Analyst | Science Communicator | Host of the Keep It Science Podcast www.zeeks-artforgeeks.com
@botanicaljim.bsky.social
Royal Society University Research Fellow at the University of Sheffield. Interested in how ABA patterns control water fluxes in leaves using ABA biosensors and image analysis. https://www.sheffield.ac.uk/biosciences/academic-staff/people/jim-rowe
@drlachie.bsky.social
BioImage Analyst at @WEHI_research. Foodie, geek, Dad. Functions on coffee and red wine. Bringer of #MicroscopistsNightmares. He/Him
@jytinevez.bsky.social
Research engineer and core facility manager at the Institut Pasteur https://research.pasteur.fr/en/team/image-analysis-hub/ Everything #TrackMate #Mastodon-sc (the tool to track lineages in microscopy videos, not the social networks etc). Views are my own
@mycroscopy.bsky.social
Microscopist and image analyst in the making. Core facility staff at BIU @helsinkiuni and loving it.🔬👩🏻🔬👩🏻💻
@ratamero.microscopy.codes
Cross-posting from idlethumbs.social/@ratamero half respectable professional (bioimaging stuff), half nerdy gremlin. views my own etc etc. he/him/ele https://erick.ratamero.com
@hohlbeinlab.bsky.social
Single-molecule stuff, 🔬, 🦠 , 🧬, ☕, Assoc. Prof. @WUR (Laboratory of Biophysics, Wageningen), he/him, 🇩🇪->🇬🇧->🇳🇱, Sites: https://jhohlbein.com, https://scholar.google.nl/citations?hl=en&user=WZZAydwAAAAJ&view_op=list_works&sortby=pubdate
@virginieuhlmann.bsky.social
Director of the BioVisionCenter at UZH and Research Group Leader at EMBL-EBI. Loves bioimage analysis, mountains, and birds.
@steveroyle.bsky.social
I'm into chord changes and cell biology. Professor at University of Warwick. Director of The Company of Biologists. Affiliate of bioRxiv. Author of "The Digital Cell". Views my own. Mastodon: @[email protected] Lab: https://roylelab.org
@drannecarpenter.bsky.social
Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
@bethcimini.bsky.social
She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.
@florianjug.bsky.social
Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.
@guijacquemet.bsky.social
Associate Prof at Abo Akademi University, Turku, Finland. Cell biologist interested in microscopy and image analysis. My opinions are my own. cellmig.org
@henriqueslab.bsky.social
@AIOpticalBioLab.bsky.social. Group Leader #ITQB & H. Prof #UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own - henriqueslab.org -
@martinjones.bsky.social
Ex-physicist in a biology institute, working on image analysis and building new hardware at the Francis Crick Institute ORCID: 0000-0003-0994-5652
@haesleinhuepf.bsky.social
Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine